Commit ed895bf7 authored by Trevor Bedford's avatar Trevor Bedford

Initial commit with license and readme.

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## Introduction
The nextstrain project is an attempt to make flexible informatic pipelines and visualization tools to track ongoing pathogen evolution as sequence data emerges. The nextstrain project derives from [nextflu](https://github.com/blab/nextflu), which was specific to influenza evolution.
The current repo is very much a work-in-progress. We recommend that you use [nextflu](https://github.com/blab/nextflu) instead for current applications. At some point, this repo will takeover from the nextflu repo.
## Auspice
*Auspice* is the web app that gives an interactive display of inferences produced by *augur* pipeline.
## License and copyright
Copyright 2014-2016 Trevor Bedford and Richard Neher.
Source code to nextflu is made available under the terms of the [GNU Affero General Public License](LICENSE.txt) (AGPL). nextflu is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU Affero General Public License for more details.
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